Transcript: LINC02398:23

Basic information

LNCipedia transcript ID: LINC02398:23 
LNCipedia gene ID: LINC02398
RefSeq ID: NR_040098
Location (hg19): chr12:20167619-20251802
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 526 bp
Exons: 3
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT027220; NR_040098; NR_040098.1
Alternative gene names: LOC100506393


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -151.0947 non-coding 
CPAT coding probability 12.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02398:23 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PDE3A-1:2
4.0 lnc-PDE3A-1:2
4.1 lnc-AEBP2-4:10
5.0 lnc-AEBP2-4:10
5.1 LINC02398:11
5.2 LINC02398:23