Transcript: LINC02400:14

Basic information

LNCipedia transcript ID: LINC02400:14 
LNCipedia gene ID: LINC02400
Location (hg19): chr12:42157955-42159375
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 500 bp
Exons: 3
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT027752; FPKM1_group_6095_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -54.4283 non-coding 
CPAT coding probability 7.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02400:14 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PDZRN4-1:10
4.0 lnc-PDZRN4-1:10
4.1 lnc-PDZRN4-1:10
5.0 lnc-PDZRN4-1:10
5.1 LINC02400:2
5.2 LINC02400:14