Transcript: LINC02400:15

Basic information

LNCipedia transcript ID: LINC02400:15 
LNCipedia gene ID: LINC02400
Location (hg19): chr12:42157956-42159375
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 435 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00021102; NONHSAT027754
Alternative gene names: XLOC_009714; linc-PPHLN1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -54.4283 non-coding 
CPAT coding probability 0.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02400:15 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PDZRN4-1:1
3.1 lnc-PDZRN4-1:3
4.0 lnc-PDZRN4-1:3
4.1 lnc-PDZRN4-1:3
5.0 lnc-PDZRN4-1:3
5.1 LINC02400:3
5.2 LINC02400:15