Transcript: LINC02405:28

Basic information

LNCipedia transcript ID: LINC02405:28 
HGNC Gene Symbol: LINC02405    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2405
Ensembl Gene ID: ENSG00000249345
Ensembl Transcript ID: ENST00000512624
Location (hg19): chr12:127399749-127544942
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1361 bp
Exons: 7
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000512624.6
Alternative gene names: ENSG00000249345.6; RP11-575F12.1; LINC02405


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -30.9838 non-coding 
CPAT coding probability 18.20% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02405:28 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-SLC15A4-15:8
4.1 lnc-SLC15A4-15:8
5.0 lnc-SLC15A4-15:8
5.1 LINC02405:13
5.2 LINC02405:28