Transcript: LINC02417:6

Basic information

LNCipedia transcript ID: LINC02417:6 
LNCipedia gene ID: LINC02417
Location (hg19): chr12:3477467-3480686
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 309 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT025517; FPKM1_group_5642_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -264.6283 non-coding 
CPAT coding probability 2.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02417:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PRMT8-1:3
4.0 lnc-PRMT8-1:3
4.1 lnc-PRMT8-1:3
5.0 lnc-PRMT8-1:3
5.1 LINC02417:3
5.2 LINC02417:6