Transcript: LINC02427:13

Basic information

LNCipedia transcript ID: LINC02427:13 
HGNC Gene Symbol: LINC02427    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2427
Ensembl Gene ID: ENSG00000271538
Ensembl Transcript ID: ENST00000605270
Location (hg19): chr4:185427614-185458708
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1059 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000605270.1; ENST00000605270.5
Alternative gene names: ENSG00000271538.1; RP11-326I11.4; ENSG00000271538.5; LINC02427


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -101.1065 non-coding 
CPAT coding probability 0.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02427:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-IRF2-4:2
4.0 lnc-IRF2-4:2
4.1 lnc-IRF2-1:5
5.0 lnc-IRF2-1:5
5.1 LINC02427:3
5.2 LINC02427:13