Transcript: LINC02442:6

Basic information

LNCipedia transcript ID: LINC02442:6 
LNCipedia gene ID: LINC02442
Location (hg19): chr12:67964817-67983740
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 515 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00020825; NONHSAT029259
Alternative gene names: XLOC_010113; linc-GRIP1-6


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -267.6864 non-coding 
CPAT coding probability 13.45% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02442:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-IFNG-3:2
3.1 lnc-IFNG-4:2
4.0 lnc-IFNG-4:2
4.1 lnc-IFNG-4:2
5.0 lnc-IFNG-4:2
5.1 LINC02442:3
5.2 LINC02442:6