Transcript: LINC02443:19

Basic information

LNCipedia transcript ID: LINC02443:19 
HGNC Gene Symbol: LINC02443    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2443
Ensembl Gene ID: ENSG00000256115
Ensembl Transcript ID: ENST00000540237
Location (hg19): chr12:5343840-5347438
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 324 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000540237; ENST00000540237.1; RP11-319E16.1-003; OTTHUMT00000400476.1; NONHSAT025991
Alternative gene names: ENSG00000256115; RP11-319E16.1; ENSG00000256115.1; OTTHUMG00000168644.1; ENSG00000256115.5; LINC02443


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -247.7101 non-coding 
CPAT coding probability 5.33% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02443:19 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ANO2-2:4
3.1 lnc-ANO2-2:4
4.0 lnc-ANO2-2:4
4.1 lnc-ANO2-2:4
5.0 lnc-ANO2-2:4
5.1 LINC02443:10
5.2 LINC02443:19