Transcript: LINC02447:17

Basic information

LNCipedia transcript ID: LINC02447:17 
HGNC Gene Symbol: LINC02447    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2447
Ensembl Gene ID: ENSG00000245468
Ensembl Transcript ID: ENST00000501888
Location (hg19): chr4:7102967-7105112
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2146 bp
Exons: 1
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000501888; ENST00000501888.2; RP11-367J11.4-001; OTTHUMT00000358881.1; NONHSAT095048
Alternative gene names: ENSG00000245468; RP11-367J11.4; ENSG00000245468.2; OTTHUMG00000160013.1; ENSG00000245468.3; RP11-367J11.3; LINC02447


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -2.0422 non-coding 
CPAT coding probability 70.67% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC02447:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-GRPEL1-1:2
3.1 lnc-GRPEL1-1:2
4.0 lnc-GRPEL1-1:2
4.1 lnc-GRPEL1-1:2
5.0 lnc-GRPEL1-1:2
5.1 LINC02447:4
5.2 LINC02447:17