Transcript: LINC02453:19

Basic information

LNCipedia transcript ID: LINC02453:19 
HGNC Gene Symbol: LINC02453    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2453
Ensembl Gene ID: ENSG00000245017
Ensembl Transcript ID: ENST00000501499
RefSeq ID: NR_038383
Location (hg19): chr12:98879322-98897633
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1825 bp
Exons: 4
Sources: Biogazelle lncRNA chip; Broad Institute; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000501499; TCONS_00020218; NR_038383; ENST00000501499.1; NR_038383.1
Alternative gene names: ENSG00000245017; XLOC_010167; linc-CDK17-4; ENSG00000245017.2; RP11-181C3.1; LINC02453; LOC643770


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -137.8765 non-coding 
CPAT coding probability 0.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02453:19 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-RP11-181C3.1.1-1:6
3.1 lnc-RP11-181C3.1.1-1:6
4.0 lnc-RP11-181C3.1.1-1:6
4.1 lnc-RP11-181C3.1.1-1:6
5.0 lnc-RP11-181C3.1.1-1:6
5.1 LINC02453:7
5.2 LINC02453:19