Transcript: LINC02463:3

Basic information

LNCipedia transcript ID: LINC02463:3 
HGNC Gene Symbol: LINC02463    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2463
Ensembl Gene ID: ENSG00000257683
Ensembl Transcript ID: ENST00000546414
Location (hg19): chr12:116248164-116323942
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 497 bp
Exons: 3
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000546414; ENST00000546414.1; RP11-110L15.2-001; OTTHUMT00000403878.1; NONHSAT030919
Alternative gene names: ENSG00000257683; RP11-110L15.2; ENSG00000257683.1; OTTHUMG00000169403.1; LINC02463


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -49.4298 non-coding 
CPAT coding probability 0.63% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02463:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MED13L-2:1
3.1 lnc-MED13L-2:1
4.0 lnc-MED13L-2:1
4.1 lnc-MED13L-2:1
5.0 lnc-MED13L-2:1
5.1 LINC02463:2
5.2 LINC02463:3