Transcript: LINC02475:9

Basic information

LNCipedia transcript ID: LINC02475:9 
LNCipedia gene ID: LINC02475
Location (hg19): chr4:44018877-44024095
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3015 bp
Exons: 2
Sources: NONCODE v4; Hangauer et al., 2013
Alternative transcript names: NONHSAT096221; FPKM1_group_23304_transcript_1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 1.4352 non-coding 
CPAT coding probability 1.62% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02475:9 no no no no

Available literature

  1. Iyer (2015), The landscape of long noncoding RNAs in the human transcriptome., Nat. Genet.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GUF1-3:4
4.0 lnc-GUF1-3:4
4.1 lnc-GUF1-3:4
5.0 lnc-GUF1-3:4
5.1 LINC02475:2
5.2 LINC02475:9