Transcript: LINC02482:17

Basic information

LNCipedia transcript ID: LINC02482:17 
LNCipedia gene ID: LINC02482
Location (hg19): chr4:6671955-6675623
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3669 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000251580.1|FTMT21400000278.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 85.6149 coding 
CPAT coding probability 6.55% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
LINC02482:17 no no no no

Available literature

  1. Bannon (2015), Identification of long noncoding RNAs dysregulated in the midbrain of human cocaine abusers., J. Neurochem.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-MRFAP1L1-2:7
5.0 lnc-MRFAP1L1-2:7
5.1 LINC02482:3
5.2 LINC02482:17