Transcript: LINC02484:13

Basic information

LNCipedia transcript ID: LINC02484:13 
HGNC Gene Symbol: LINC02484    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2484
Ensembl Gene ID: ENSG00000248685
Ensembl Transcript ID: ENST00000513843
Location (hg19): chr4:34122516-34260749
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 546 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000513843; ENST00000513843.1; RP11-548L20.1-001; OTTHUMT00000360363.1; NONHSAT095975; ENST00000513843.5
Alternative gene names: ENSG00000248685; RP11-548L20.1; ENSG00000248685.1; OTTHUMG00000160362.1; ENSG00000248685.5; LINC02484


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -844.479 non-coding 
CPAT coding probability 0.10% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02484:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ARAP2-3:2
3.1 lnc-ARAP2-5:2
4.0 lnc-ARAP2-5:2
4.1 lnc-ARAP2-5:2
5.0 lnc-ARAP2-5:2
5.1 LINC02484:7
5.2 LINC02484:13