Transcript: LINC02494:7

Basic information

LNCipedia transcript ID: LINC02494:7 
LNCipedia gene ID: LINC02494
Ensembl Gene ID: ENSG00000250078
Ensembl Transcript ID: ENST00000508292
Location (hg19): chr4:59428330-59431287
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 420 bp
Exons: 3
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00007764; ENST00000508292; ENST00000508292.1; RP11-577G20.2-001; OTTHUMT00000365853.1; NONHSAT096572
Alternative gene names: XLOC_003961; linc-IGFBP7-6; ENSG00000250078; RP11-577G20.2; ENSG00000250078.1; OTTHUMG00000161714.1; AC019133.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -6.2021 non-coding 
CPAT coding probability 0.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02494:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-IGFBP7-3:2
3.1 lnc-IGFBP7-4:2
4.0 lnc-IGFBP7-4:2
4.1 lnc-IGFBP7-4:2
5.0 lnc-IGFBP7-4:2
5.1 LINC02494:3
5.2 LINC02494:7