Transcript: LINC02501:9

Basic information

LNCipedia transcript ID: LINC02501:9 
LNCipedia gene ID: LINC02501
Location (hg19): chr4:31544377-31560351
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 240 bp
Exons: 3
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00008774; NONHSAT095947
Alternative gene names: XLOC_003495; linc-DTHD1-11


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -80.4176 non-coding 
CPAT coding probability 1.21% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02501:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-PCDH7-3:2
3.1 lnc-PCDH7-3:2
4.0 lnc-PCDH7-3:2
4.1 lnc-PCDH7-3:2
5.0 lnc-PCDH7-3:2
5.1 LINC02501:5
5.2 LINC02501:9