Transcript: LINC02502:9

Basic information

LNCipedia transcript ID: LINC02502:9 
LNCipedia gene ID: LINC02502
Location (hg19): chr4:120860695-120885376
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 570 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000505122.1; RP11-700N1.1-001; OTTHUMT00000364578.1; NONHSAT098109
Alternative gene names: ENSG00000250392.1; RP11-700N1.1; OTTHUMG00000161334.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -28.0531 non-coding 
CPAT coding probability 5.07% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02502:9 no no no no

Available literature

  1. Di Salvo (2015), Right ventricular long noncoding RNA expression in human heart failure., Pulm Circ


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC110373.1-5:1
4.0 lnc-AC110373.1-5:1
4.1 lnc-AC110373.1-5:1
5.0 lnc-AC110373.1-5:1
5.1 LINC02502:4
5.2 LINC02502:9