Transcript: LINC02519:34

Basic information

LNCipedia transcript ID: LINC02519:34 
HGNC Gene Symbol: LINC02519    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2519
Ensembl Gene ID: ENSG00000226194
Ensembl Transcript ID: ENST00000433388
Location (hg19): chr6:169770093-169788480
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 588 bp
Exons: 2
Sources: Broad Institute; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: TCONS_00011626; ENST00000433388; ENST00000433388.1; RP1-137D17.1-002; OTTHUMT00000043212.1; NONHSAT116198; ENST00000433388.5
Alternative gene names: XLOC_005938; linc-THBS2-2; ENSG00000226194; RP1-137D17.1; ENSG00000226194.1; OTTHUMG00000016055.1; ENSG00000226194.5; LINC02519


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 29.7269 non-coding 
CPAT coding probability 17.22% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02519:34 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-WDR27-2:2
3.1 lnc-WDR27-2:2
4.0 lnc-WDR27-2:2
4.1 lnc-WDR27-1:18
5.0 lnc-WDR27-1:18
5.1 LINC02519:17
5.2 LINC02519:34