Transcript: LINC02525:31

Basic information

LNCipedia transcript ID: LINC02525:31 
HGNC Gene Symbol: LINC02525    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2525
Ensembl Gene ID: ENSG00000230269
Ensembl Transcript ID: ENST00000425384
Location (hg19): chr6:3182978-3195981
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1469 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000425384.2; ENST00000425384.6
Alternative gene names: ENSG00000230269.2; RP1-40E16.9; ENSG00000230269.6; LINC02525


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -14.8088 non-coding 
CPAT coding probability 23.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02525:31 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TUBB2A-2:8
4.0 lnc-TUBB2A-2:8
4.1 lnc-TUBB2A-2:8
5.0 lnc-TUBB2A-2:8
5.1 LINC02525:16
5.2 LINC02525:31