Transcript: LINC02527:6

Basic information

LNCipedia transcript ID: LINC02527:6 
LNCipedia gene ID: LINC02527
Location (hg19): chr6:112221562-112230481
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1244 bp
Exons: 3
Sources: Biogazelle lncRNA chip; Broad Institute; Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000515699; TCONS_00011539; NONHSAT114491
Alternative gene names: ENSG00000250729; XLOC_005806; linc-FYN; AL158035.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -62.2645 non-coding 
CPAT coding probability 2.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02527:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FYN-1:2
3.1 lnc-FYN-1:2
4.0 lnc-FYN-1:2
4.1 lnc-FYN-1:2
5.0 lnc-FYN-1:2
5.1 LINC02527:3
5.2 LINC02527:6