Transcript: LINC02532:49

Basic information

LNCipedia transcript ID: LINC02532:49 
HGNC Gene Symbol: LINC02532    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2532
Ensembl Gene ID: ENSG00000235142
Ensembl Transcript ID: ENST00000602934
Location (hg19): chr6:107218001-107222879
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2464 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT114270; ENST00000602934.1
Alternative gene names: ENSG00000235142.3; RP1-60O19.1; ENSG00000235142.7; LINC02532


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -110.1938 non-coding 
CPAT coding probability 5.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02532:49 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RTN4IP1-2:15
4.0 lnc-RTN4IP1-2:15
4.1 lnc-RTN4IP1-2:15
5.0 lnc-RTN4IP1-2:15
5.1 LINC02532:22
5.2 LINC02532:49