Transcript: LINC02551:9

Basic information

LNCipedia transcript ID: LINC02551:9 
LNCipedia gene ID: LINC02551
Location (hg19): chr11:130731861-130744709
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 6047 bp
Exons: 4
Sources: NONCODE v4
Alternative transcript names: NONHSAT025148
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -33.2252 non-coding 
CPAT coding probability 3.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02551:9 no no no no

Available literature

  1. Balloy (2017), Bronchial Epithelial Cells from Cystic Fibrosis Patients Express a Specific Long Non-coding RNA Signature upon <i>Pseudomonas aeruginosa</i> Infection., Front Cell Infect Microbiol


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RP11-890B15.2.1-1:2
4.0 lnc-RP11-890B15.2.1-1:2
4.1 lnc-RP11-890B15.2.1-1:2
5.0 lnc-RP11-890B15.2.1-1:2
5.1 LINC02551:2
5.2 LINC02551:9