Transcript: LINC02577:16

Basic information

LNCipedia transcript ID: LINC02577:16 
LNCipedia gene ID: LINC02577
Location (hg19): chr7:106415464-106425299
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 5042 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000228742.5|MICT00000330828.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 9.5584 non-coding 
CPAT coding probability 1.41% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02577:16 no no no no

Available literature

  1. Kim (2017), Epidermal long non-coding RNAs are regulated by ultraviolet irradiation., Gene


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-PIK3CG-2:8
5.0 lnc-PIK3CG-2:8
5.1 LINC02577:4
5.2 LINC02577:16