Transcript: LINC02577:20

Basic information

LNCipedia transcript ID: LINC02577:20 
LNCipedia gene ID: LINC02577
Location (hg19): chr7:106415488-106420592
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1802 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT122660
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 9.5584 non-coding 
CPAT coding probability 2.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC02577:20 no no no no

Available literature

  1. Kim (2017), Epidermal long non-coding RNAs are regulated by ultraviolet irradiation., Gene


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PIK3CG-2:5
4.0 lnc-PIK3CG-2:5
4.1 lnc-PIK3CG-2:5
5.0 lnc-PIK3CG-2:5
5.1 LINC02577:8
5.2 LINC02577:20