Transcript: LINC2194:9

Basic information

LNCipedia transcript ID: LINC2194:9 
HGNC Gene Symbol: LINC2194    
HGNC Full Gene Name: long intergenic non-protein coding RNA 2194
Ensembl Gene ID: ENSG00000260264
Ensembl Transcript ID: ENST00000567624
Location (hg19): chr16:24249303-24258866
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 506 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000567624.1; AC004125.3-002; OTTHUMT00000435951.1; NONHSAT141153
Alternative gene names: ENSG00000260264.1; AC004125.3; OTTHUMG00000177234.1; LINC2194


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -126.7107 non-coding 
CPAT coding probability 0.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LINC2194:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CACNG3-1:3
4.0 lnc-CACNG3-1:3
4.1 lnc-CACNG3-1:3
5.0 lnc-CACNG3-1:3
5.1 LINC2194:4
5.2 LINC2194:9