Transcript: LIPE-AS1:27

Basic information

LNCipedia transcript ID: LIPE-AS1:27 
LNCipedia gene ID: LIPE-AS1
Location (hg19): chr19:42928433-43001234
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1291 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000213904.4|HBMT00000711856.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 0.0048 non-coding 
CPAT coding probability 26.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LIPE-AS1:27 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 LIPE-AS1:27
5.0 LIPE-AS1:27
5.1 LIPE-AS1:27
5.2 LIPE-AS1:27