Transcript: LIPE-AS1:4

Basic information

LNCipedia transcript ID: LIPE-AS1:4 
HGNC Gene Symbol: LIPE-AS1    
HGNC Full Gene Name: LIPE antisense RNA 1
Ensembl Gene ID: ENSG00000213904
Ensembl Transcript ID: ENST00000597203
Location (hg19): chr19:42901320-42989746
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 556 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT066549; ENST00000597203.1
Alternative gene names: ENSG00000213904.4; LIPE-AS1; ENSG00000213904.8;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.9895 non-coding 
CPAT coding probability 0.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LIPE-AS1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-AC011497.1-2:3
4.0 LIPE-AS1:4
4.1 LIPE-AS1:4
5.0 LIPE-AS1:4
5.1 LIPE-AS1:4
5.2 LIPE-AS1:4