Transcript: LMO7DN-IT1:2

Basic information

LNCipedia transcript ID: LMO7DN-IT1:2 
HGNC Gene Symbol: LMO7DN-IT1    
HGNC Full Gene Name: LMO7DN intronic transcript 1
Ensembl Gene ID: ENSG00000223458
Ensembl Transcript ID: ENST00000436872
RefSeq ID: NR_126373
Location (hg19): chr13:76451022-76455263
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 321 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000436872.2; NR_126373.1
Alternative gene names: ENSG00000223458.2; LMO7DN-IT1; TCONS_00021569


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -152.3661 non-coding 
CPAT coding probability 0.11% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LMO7DN-IT1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 LMO7DN-IT1:2
4.1 LMO7DN-IT1:2
5.0 LMO7DN-IT1:2
5.1 LMO7DN-IT1:2
5.2 LMO7DN-IT1:2