Transcript: LNX1-AS1:2

Basic information

LNCipedia transcript ID: LNX1-AS1:2 
LNCipedia gene ID: LNX1-AS1
Location (hg19): chr4:54366244-54389443
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 553 bp
Exons: 4
Sources: NONCODE v4; Refseq - Dec 2014
Alternative transcript names: NONHSAT096396; NR_046622
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -87.4788 non-coding 
CPAT coding probability 1.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LNX1-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GSX2-4:5
4.0 LNX1-AS1:2
4.1 LNX1-AS1:2
5.0 LNX1-AS1:2
5.1 LNX1-AS1:2
5.2 LNX1-AS1:2