Transcript: LPP-AS1:2

Basic information

LNCipedia transcript ID: LPP-AS1:2 
LNCipedia gene ID: LPP-AS1
RefSeq ID: NR_046623
Location (hg19): chr3:188280025-188286454
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 495 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_046623; NR_046623.1
Alternative gene names: ; LPP-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -158.9435 non-coding 
CPAT coding probability 3.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LPP-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-BCL6-6:2
4.0 LPP-AS1:2
4.1 LPP-AS1:2
5.0 LPP-AS1:2
5.1 LPP-AS1:2
5.2 LPP-AS1:2