Transcript: LRRC75A-AS1:54

Basic information

LNCipedia transcript ID: LRRC75A-AS1:54 
LNCipedia gene ID: LRRC75A-AS1
Location (hg19): chr17:16342364-16344841
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 827 bp
Exons: 5
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA561:1
Alternative gene names: MGC40157


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -46.8536 non-coding 
CPAT coding probability 13.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LRRC75A-AS1:54 no no no no

Available literature

  1. Wang (2018), A three‑lncRNA signature for prognosis prediction of acute myeloid leukemia in patients., Mol Med Rep
  2. Zhang (2016), Long noncoding RNA expression profile in fibroblast-like synoviocytes from patients with rheumatoid arthritis., Arthritis Res. Ther.
  3. Zhang (2014), Species-specific alternative splicing leads to unique expression of sno-lncRNAs., BMC Genomics
  4. Cao (2013), Analysis of long non-coding RNA expression profiles in gastric cancer., World J. Gastroenterol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 LRRC75A-AS1:54
4.1 LRRC75A-AS1:54
5.0 LRRC75A-AS1:54
5.1 LRRC75A-AS1:54
5.2 LRRC75A-AS1:54