Transcript: LRRC75A-AS1:77

Basic information

LNCipedia transcript ID: LRRC75A-AS1:77 
LNCipedia gene ID: LRRC75A-AS1
RefSeq ID: NR_027161
Location (hg19): chr17:16342301-16345342
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1334 bp
Exons: 4
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_027161.1
Alternative gene names: LRRC75A-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -14.8222 non-coding 
CPAT coding probability 8.46% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LRRC75A-AS1:77 no no no no

Available literature

  1. Wang (2018), A three‑lncRNA signature for prognosis prediction of acute myeloid leukemia in patients., Mol Med Rep
  2. Zhang (2016), Long noncoding RNA expression profile in fibroblast-like synoviocytes from patients with rheumatoid arthritis., Arthritis Res. Ther.
  3. Zhang (2014), Species-specific alternative splicing leads to unique expression of sno-lncRNAs., BMC Genomics
  4. Cao (2013), Analysis of long non-coding RNA expression profiles in gastric cancer., World J. Gastroenterol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 LRRC75A-AS1:77
5.1 LRRC75A-AS1:77
5.2 LRRC75A-AS1:77