Transcript: LY86-AS1:6

Basic information

LNCipedia transcript ID: LY86-AS1:6 
HGNC Gene Symbol: LY86-AS1    
HGNC Full Gene Name: LY86 antisense RNA 1
Ensembl Gene ID: ENSG00000216863
Ensembl Transcript ID: ENST00000435641
Location (hg19): chr6:6360824-6622928
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2819 bp
Exons: 7
Sources: Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000435641.1; LY86-AS1-001; OTTHUMT00000280396.1; ENST00000435641.5
Alternative gene names: ENSG00000216863.4; LY86-AS1; OTTHUMG00000014192.2; ENSG00000216863.5; ENSG00000216863.9; FLJ33708


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -9.8056 non-coding 
CPAT coding probability 15.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
LY86-AS1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-F13A1-1:2
4.0 LY86-AS1:6
4.1 LY86-AS1:6
5.0 LY86-AS1:6
5.1 LY86-AS1:6
5.2 LY86-AS1:6