Transcript: MACROD2-AS1:5

Basic information

LNCipedia transcript ID: MACROD2-AS1:5 
LNCipedia gene ID: MACROD2-AS1
Location (hg19): chr20:14864898-14910154
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 477 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT078722
Alternative gene names: BA318C17.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -34.0284 non-coding 
CPAT coding probability 6.68% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MACROD2-AS1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FLRT3-1:6
4.0 MACROD2-AS1:5
4.1 MACROD2-AS1:5
5.0 MACROD2-AS1:5
5.1 MACROD2-AS1:5
5.2 MACROD2-AS1:5