Transcript: MACROD2-AS1:6

Basic information

LNCipedia transcript ID: MACROD2-AS1:6 
LNCipedia gene ID: MACROD2-AS1
Location (hg19): chr20:14864896-14910142
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 676 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT078721
Alternative gene names: BA318C17.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -34.0284 non-coding 
CPAT coding probability 1.32% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MACROD2-AS1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FLRT3-1:7
4.0 MACROD2-AS1:6
4.1 MACROD2-AS1:6
5.0 MACROD2-AS1:6
5.1 MACROD2-AS1:6
5.2 MACROD2-AS1:6