Transcript: MAFG-DT:21

Basic information

LNCipedia transcript ID: MAFG-DT:21 
HGNC Gene Symbol: MAFG-DT    
HGNC Full Gene Name: MAFG divergent transcript
Ensembl Gene ID: ENSG00000265688
Ensembl Transcript ID: ENST00000583492
Location (hg19): chr17:79886277-79888393
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 969 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000583492.1; MAFG-AS1-002; OTTHUMT00000441952.1; NONHSAT056600
Alternative gene names: ENSG00000265688.1; MAFG-AS1; OTTHUMG00000178435.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -32.3518 non-coding 
CPAT coding probability 10.98% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MAFG-DT:21 no no no no

Available literature

  1. Peffers (2015), Transcriptome analysis of ageing in uninjured human Achilles tendon., Arthritis Res. Ther.
  2. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-NPB-2:4
4.0 MAFG-AS1:5
4.1 MAFG-AS1:5
5.0 MAFG-AS1:5
5.1 MAFG-DT:11
5.2 MAFG-DT:21