Transcript: MAGI2-AS3:12

Basic information

LNCipedia transcript ID: MAGI2-AS3:12 
LNCipedia gene ID: MAGI2-AS3
Location (hg19): chr7:79083012-79089875
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1726 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT121707
Alternative gene names: ; ENST00000414797


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 2 non-coding 
PhyloCSF score -163.3564 non-coding 
CPAT coding probability 1.39% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
MAGI2-AS3:12 no no no no

Available literature

  1. Yang (2018), Long non-coding RNA (lncRNA) MAGI2-AS3 inhibits breast cancer cell growth by targeting the Fas/FasL signalling pathway., Hum. Cell
  2. Long (2016), Distinct expression profiles of lncRNAs between early-onset preeclampsia and preterm controls., Clin. Chim. Acta
  3. Li (2015), Expression of long non-coding RNA DLX6-AS1 in lung adenocarcinoma., Cancer Cell Int.
  4. Li (2015), Study on expression of lncRNA RGMB-AS1 and repulsive guidance molecule b in non-small cell lung cancer., Diagn Pathol


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GNAI1-2:17
4.0 MAGI2-AS3:12
4.1 MAGI2-AS3:12
5.0 MAGI2-AS3:12
5.1 MAGI2-AS3:12
5.2 MAGI2-AS3:12