Transcript: MAGI2-AS3:66

Basic information

LNCipedia transcript ID: MAGI2-AS3:66 
LNCipedia gene ID: MAGI2-AS3
Location (hg19): chr7:79082913-79097682
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 9589 bp
Exons: 6
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000234456.3|HBMT00001317085.1
Alternative gene names: ENST00000414797


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -4.2438 non-coding 
CPAT coding probability 0.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MAGI2-AS3:66 no no no no

Available literature

  1. Yang (2018), Long non-coding RNA (lncRNA) MAGI2-AS3 inhibits breast cancer cell growth by targeting the Fas/FasL signalling pathway., Hum. Cell
  2. Long (2016), Distinct expression profiles of lncRNAs between early-onset preeclampsia and preterm controls., Clin. Chim. Acta
  3. Li (2015), Expression of long non-coding RNA DLX6-AS1 in lung adenocarcinoma., Cancer Cell Int.
  4. Li (2015), Study on expression of lncRNA RGMB-AS1 and repulsive guidance molecule b in non-small cell lung cancer., Diagn Pathol


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 MAGI2-AS3:66
5.0 MAGI2-AS3:66
5.1 MAGI2-AS3:66
5.2 MAGI2-AS3:66