Transcript: MAMDC2-AS1:17

Basic information

LNCipedia transcript ID: MAMDC2-AS1:17 
LNCipedia gene ID: MAMDC2-AS1
Location (hg19): chr9:72702335-72703913
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 891 bp
Exons: 2
Sources: NONCODE v4; Ensembl release 75 - Feb 2014
Alternative transcript names: NONHSAT131794; ENST00000585478.1
Alternative gene names: ENSG00000204706.10; MAMDC2-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -150.9718 non-coding 
CPAT coding probability 9.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MAMDC2-AS1:17 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KLF9-1:15
4.0 MAMDC2-AS1:17
4.1 MAMDC2-AS1:17
5.0 MAMDC2-AS1:17
5.1 MAMDC2-AS1:17
5.2 MAMDC2-AS1:17