Transcript: MAP3K20-AS1:23

Basic information

LNCipedia transcript ID: MAP3K20-AS1:23 
LNCipedia gene ID: MAP3K20-AS1
Location (hg19): chr2:174062440-174146764
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2538 bp
Exons: 8
Sources: NONCODE v4
Alternative transcript names: NONHSAT075529
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 111.4021 coding 
CPAT coding probability 17.00% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
MAP3K20-AS1:23 no no no no

Available literature

  1. Ding (2014), Expression and clinical significance of the long non-coding RNA PVT1 in human gastric cancer., Onco Targets Ther
  2. Strausberg (2002), Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences., Proc. Natl. Acad. Sci. U.S.A.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SP3-3:6
4.0 MLK7-AS1:2
4.1 MLK7-AS1:2
5.0 MLK7-AS1:2
5.1 MAP3K20-AS1:10
5.2 MAP3K20-AS1:23