Transcript: MAST4-AS1:1

Basic information

LNCipedia transcript ID: MAST4-AS1:1 
LNCipedia gene ID: MAST4-AS1
RefSeq ID: NR_111908
Location (hg19): chr5:66297446-66299982
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 743 bp
Exons: 2
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_111908; NR_111908.1
Alternative gene names: ; LOC101928794


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -85.3207 non-coding 
CPAT coding probability 2.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MAST4-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CD180-1:2
4.0 MAST4-AS1:1
4.1 MAST4-AS1:1
5.0 MAST4-AS1:1
5.1 MAST4-AS1:1
5.2 MAST4-AS1:1