Transcript: MAST4-AS1:2

Basic information

LNCipedia transcript ID: MAST4-AS1:2 
HGNC Gene Symbol: MAST4-AS1    
HGNC Full Gene Name: MAST4 antisense RNA 1
Ensembl Gene ID: ENSG00000229666
Ensembl Transcript ID: ENST00000451496
Location (hg19): chr5:66297211-66299781
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 777 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000451496.1; MAST4-AS1-001; OTTHUMT00000326387.1; NONHSAT101803
Alternative gene names: ENSG00000229666.1; MAST4-AS1; OTTHUMG00000152480.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -195.9903 non-coding 
CPAT coding probability 2.48% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MAST4-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CD180-1:1
4.0 MAST4-AS1:2
4.1 MAST4-AS1:2
5.0 MAST4-AS1:2
5.1 MAST4-AS1:2
5.2 MAST4-AS1:2