Transcript: MCF2L-AS1:6

Basic information

LNCipedia transcript ID: MCF2L-AS1:6 
LNCipedia gene ID: MCF2L-AS1
Ensembl Gene ID: ENSG00000267868
Ensembl Transcript ID: ENST00000602192
Location (hg19): chr13:113619149-113620445
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1297 bp
Exons: 1
Sources: NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: NONHSAT035306; ENST00000602192.1
Alternative gene names: ENSG00000267868.1; RP11-120K24.3; ; AL356740.1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 16.9251 non-coding 
CPAT coding probability 0.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MCF2L-AS1:6 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PCID2-5:1
4.0 MCF2L-AS1:6
4.1 MCF2L-AS1:6
5.0 MCF2L-AS1:6
5.1 MCF2L-AS1:6
5.2 MCF2L-AS1:6