Transcript: MCM8-AS1:1

Basic information

LNCipedia transcript ID: MCM8-AS1:1 
HGNC Gene Symbol: MCM8-AS1    
HGNC Full Gene Name: MCM8 antisense RNA 1
Ensembl Gene ID: ENSG00000278719
Ensembl Transcript ID: ENST00000613522
Location (hg19): chr20:5971589-5986467
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 983 bp
Exons: 5
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; NONCODE v4; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000500193; NONHSAT078516; ENST00000613522.1
Alternative gene names: ENSG00000247862; AL035461.1; ENSG00000278719.1; MCM8-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -30.6658 non-coding 
CPAT coding probability 2.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MCM8-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-LRRN4-1:1
3.1 lnc-LRRN4-1:1
4.0 MCM8-AS1:1
4.1 MCM8-AS1:1
5.0 MCM8-AS1:1
5.1 MCM8-AS1:1
5.2 MCM8-AS1:1