Transcript: MEF2C-AS1:24

Basic information

LNCipedia transcript ID: MEF2C-AS1:24 
LNCipedia gene ID: MEF2C-AS1
Location (hg19): chr5:88751921-88761925
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 330 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT102714
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -423.8705 non-coding 
CPAT coding probability 0.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MEF2C-AS1:24 no no no no

Available literature

  1. Cao (2013), Analysis of long non-coding RNA expression profiles in gastric cancer., World J. Gastroenterol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RASA1-7:24
4.0 MEF2C-AS1:24
4.1 MEF2C-AS1:24
5.0 MEF2C-AS1:24
5.1 MEF2C-AS1:24
5.2 MEF2C-AS1:24