Transcript: MEF2C-AS1:58

Basic information

LNCipedia transcript ID: MEF2C-AS1:58 
HGNC Gene Symbol: MEF2C-AS1    
HGNC Full Gene Name: MEF2C antisense RNA 1
Ensembl Gene ID: ENSG00000248309
Ensembl Transcript ID: ENST00000639552
Location (hg19): chr5:88200518-88201882
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 542 bp
Exons: 3
Sources: Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000639552.1
Alternative gene names: ENSG00000248309.7; MEF2C-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -205.3019 non-coding 
CPAT coding probability 0.09% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MEF2C-AS1:58 no no no no

Available literature

  1. Cao (2013), Analysis of long non-coding RNA expression profiles in gastric cancer., World J. Gastroenterol.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 MEF2C-AS1:58
5.1 MEF2C-AS1:58
5.2 MEF2C-AS1:58