Transcript: MHENCR:15

Basic information

LNCipedia transcript ID: MHENCR:15 
LNCipedia gene ID: MHENCR
Location (hg19): chr20:62258210-62260530
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1524 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000232442.1|MICT00000222505.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 3.8842 non-coding 
CPAT coding probability 2.50% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MHENCR:15 no no no no

Available literature

  1. Chen (2017), Long noncoding RNA MHENCR promotes melanoma progression via regulating miR-425/489-mediated PI3K-Akt pathway., Am J Transl Res


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RTEL1.1-3:7
5.0 lnc-RTEL1.1-3:7
5.1 MHENCR:2
5.2 MHENCR:15