Transcript: MHENCR:16

Basic information

LNCipedia transcript ID: MHENCR:16 
LNCipedia gene ID: MHENCR
Location (hg19): chr20:62258393-62260122
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 854 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT080905
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 2.0916 non-coding 
CPAT coding probability 3.82% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MHENCR:16 no no no no

Available literature

  1. Chen (2017), Long noncoding RNA MHENCR promotes melanoma progression via regulating miR-425/489-mediated PI3K-Akt pathway., Am J Transl Res


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RTEL1.1-1:4
4.0 lnc-RTEL1.1-3:1
4.1 lnc-RTEL1.1-3:1
5.0 lnc-RTEL1.1-3:1
5.1 MHENCR:3
5.2 MHENCR:16