Transcript: MHENCR:19

Basic information

LNCipedia transcript ID: MHENCR:19 
LNCipedia gene ID: MHENCR
Location (hg19): chr20:62258577-62260060
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 608 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000232442.1|ENST00000411579.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 2.0916 non-coding 
CPAT coding probability 2.43% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MHENCR:19 no no no no

Available literature

  1. Chen (2017), Long noncoding RNA MHENCR promotes melanoma progression via regulating miR-425/489-mediated PI3K-Akt pathway., Am J Transl Res


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-RTEL1.1-3:8
5.0 lnc-RTEL1.1-3:8
5.1 MHENCR:6
5.2 MHENCR:19