Transcript: MIMT1:1

Basic information

LNCipedia transcript ID: MIMT1:1 
LNCipedia gene ID: MIMT1
Location (hg19): chr19:57352219-57359424
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 694 bp
Exons: 2
Sources: Broad Institute; NONCODE v4
Alternative transcript names: TCONS_00027634; NONHSAT068200
Alternative gene names: XLOC_013173; linc-USP29-1; MIM1; NCRNA00067; LINC00067


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -105.3126 non-coding 
CPAT coding probability 3.99% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
MIMT1:1 no no no no

Available literature

  1. Kobayashi (2014), Imprinting genes associated with endometriosis., EXCLI J
  2. Kim (2007), Genomic organization and imprinting of the Peg3 domain in bovine., Genomics


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-ZNF71-3:1
3.1 lnc-ZNF71-3:1
4.0 MIMT1:1
4.1 MIMT1:1
5.0 MIMT1:1
5.1 MIMT1:1
5.2 MIMT1:1